BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030C11SP1|AL429199
(860 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig627 1681 0.0
>3x_Contig627
Length = 1782
Score = 1681 bits (846), Expect = 0.0
Identities = 855/860 (99%)
Strand = Plus / Plus
Query: 1 gttctatctgctaagaacccccttcttatggacaatttcaattccatgtctaagacagtt 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 gttctatctgctaagtacccccttcttatggacaatttcaattccatgtctaagacagtt 725
Query: 61 catgccggtttatggtacaatctcggctgcgctgaactgttgggactattaaccgtttcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 catgccggtttatggtacaatctcggctgcgctgaactgttgggactattaaccgtttcg 785
Query: 121 gaggatagttttcgtgatgctgctattcatgcatttaaaagctcgattcgctgccagtcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 gaggatagttttcgtgatgctgctattcatgcatttaaaagctcgattcgctgccagtcg 845
Query: 181 aataacacagaatcatggataggtttaggtatcgcaacaatgaatgtcagctaccaggtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 846 aataacacagaatcatggataggtttaggtatcgcaacaatgaatgtcagctaccaggtt 905
Query: 241 tcccaacattgtttcataaaagcaattgcgctaaattccagagaaacaggaagctggtat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 906 tcccaacattgtttcataaaagcaattgcgctaaattccagagaaacaggaagctggtat 965
Query: 301 tgtatggccatgttagctctaagcaataacgacactgatctagcccgcgatattctcatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 966 tgtatggccatgttagctctaagcaataacgacactgatctagcccgcgatattctcatg 1025
Query: 361 aaagcccaaagcatcgctcctgaggattctcaatcatggctagggttggctttgatatat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1026 aaagcccaaagcatcgctcctgaggattctcaatcatggctagggttggctttgatatat 1085
Query: 421 garaaggaaggcctggctacagacagtgcaagaatgtttgcccacgcctacatacttgcc 480
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1086 gaaaaggaaggcctggctacagacagtgcaagaatgtttgcccacgcctacatacttgcc 1145
Query: 481 aatagtaaatcgaaggttgcccaactattatatgccaagaatgttttaggtagaagcata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1146 aatagtaaatcgaaggttgcccaactattatatgccaagaatgttttaggtagaagcata 1205
Query: 541 ggcaatggagataatgagagagatattattgcacagcaagagctttcgtcggtggtattt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1206 ggcaatggagataatgagagagatattattgcacagcaagagctttcgtcggtggtattt 1265
Query: 601 gggctaagccaatacctgaagaaatctcagaatgatgtctttgctactcagctttcgatt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1266 gggctaagccaatacctgaagaaatctcagaatgatgtctttgctactcagctttcgatt 1325
Query: 661 ttagcattggaaagacttcatgatttcacaaccgcaacttcattagcgcaacatctctcc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1326 ttagcattggaaagacttcatgatttcacaaccgcaacttcattagcgcaacatctctcc 1385
Query: 721 actttagttgaagagagatttgaaaagacccaggacgagagttaactactcaactttgct 780
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1386 actttagttgaagagagatttgaaaagacccaggacgagagtgaactactcaactttgct 1445
Query: 781 ttgcttaagamacaattagccaggctctatttaggatacgcagattatgaaaatgccatt 840
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1446 ttgcttaagacacaattagccaggctctatttaggatacgcagattatgaaaatgccatt 1505
Query: 841 caagctgcmacgttcgcctt 860
|||||||| |||||||||||
Sbjct: 1506 caagctgcaacgttcgcctt 1525
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4801
Number of Sequences: 1807
Number of extensions: 4801
Number of successful extensions: 22
Number of sequences better than 1.0e-20: 1
length of query: 860
length of database: 10,358,551
effective HSP length: 16
effective length of query: 844
effective length of database: 10,329,639
effective search space: 8718215316
effective search space used: 8718215316
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)